| Element | Missed Instructions | Cov. | Missed Branches | Cov. | Missed | Cxty | Missed | Lines | Missed | Methods |
| Total | 1,644 of 1,644 | 0% | 182 of 182 | 0% | 107 | 107 | 303 | 303 | 16 | 16 |
| runBlastOrFasta(String) | 0% | 0% | 34 | 34 | 123 | 123 | 1 | 1 | ||
| SshPSUClient(String[]) | 0% | 0% | 17 | 17 | 30 | 30 | 1 | 1 | ||
| getProperties() | 0% | 0% | 21 | 21 | 31 | 31 | 1 | 1 | ||
| runProgram() | 0% | 0% | 7 | 7 | 31 | 31 | 1 | 1 | ||
| run() | 0% | 0% | 7 | 7 | 12 | 12 | 1 | 1 | ||
| getSftpClient() | 0% | 0% | 4 | 4 | 19 | 19 | 1 | 1 | ||
| waitUntilFileAppears(String) | 0% | 0% | 4 | 4 | 14 | 14 | 1 | 1 | ||
| SshPSUClient(String) | 0% | n/a | 1 | 1 | 15 | 15 | 1 | 1 | ||
| readListFile(String) | 0% | 0% | 3 | 3 | 12 | 12 | 1 | 1 | ||
| fileExists(SftpClient, String, String) | 0% | 0% | 3 | 3 | 10 | 10 | 1 | 1 | ||
| rescue() | 0% | n/a | 1 | 1 | 8 | 8 | 1 | 1 | ||
| main(String[]) | 0% | n/a | 1 | 1 | 2 | 2 | 1 | 1 | ||
| getStdOutBuffer() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getStdOut() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getStdErr() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| static {...} | 0% | n/a | 1 | 1 | 2 | 2 | 1 | 1 |